# DIC info (using the rule, pD = Dbar-Dhat) # and Rhat is the potential scale reduction factor (at convergence, Rhat=1). # For each parameter, n.eff is a crude measure of effective sample size, # Cumulative: n.sims = 1500 iterations saved # Current: 3 chains, each with 1000 iterations (first 500 discarded) # Inference for Bugs model at "/Users/oliviergimenez/Desktop/nummodel.txt", When the run is complete, a prompt will reappear, then just type the following command to get the result: print(schools.sim) You might get a weird message starting by err:ole, just ignore it. Run the model schools.sim <- bugs(data, inits, model.file = model.file1,parameters=parameters,n.chains = 3, n.iter = 1000, OpenBUGS.pgm=OpenBUGS.pgm, WINE=WINE, WINEPATH=WINEPATH,useWINE=T)
The are the parameters to save parameters = c("theta", "mu.theta", "sigma.theta") OpenBUGS.pgm="/Applications/OpenBUGS323/OpenBUGS.exe" WINEPATH="/usr/local/Cellar/wine/2.0.4/bin/winepath" Set the Wine working directory and the directory to OpenBUGS, and change the OpenBUGS.exe location as necessary: WINE="/usr/local/Cellar/wine/2.0.4/bin/wine" Load the OpenBUGS Package library(R2OpenBUGS)ĭefine the model, write it to a text file and have a look nummodel <- function()
How to run windows programs on mac wine install#
Install the package R2OpenBUGS by typing in the R console:.Now we would like to run OpenBUGS from R. Then, you just need to tye in the following command in the Terminal, and you should see an OpenBUGS windows poping up: wine OpenBUGS On my laptop, it can be achieved via the command: cd /Applications/OpenBUGS323 OpenBUGS is now installed and ready to be used! You can run it by first going to the directory where OpenBUGS was installed. To install OpenBUGS, still in Terminal, go to the directory where the file was downloaded and type (you might need to unzip the file you downloaded first): wine OpenBUGS323setup.exe
How to run windows programs on mac wine download#
Next, download the Windows version of OpenBUGS here Opening Terminal, then type in the command: brew install wine Wine which will allow you to run any Windows programs (.exe) on your Mac. This program will make the installation of any other programs on your Mac so easy! This tutorial is an adaptation of () and (). Below are the steps to install `OpenBUGS` then to run it from your Mac either natively or from `R`. I had to use the good old `OpenBUGS` for some analyses that cannot be done in `JAGS`.
0 kommentar(er)
